|
|
|
|
|
|
|
|
|
|
|
|
|
|
APBC2005 Accepted Full
Papers |
|
|
|
|
Paper ID |
Paper Title |
|
107 |
A Graph Database with Visual Queries
for Genomics |
|
111 |
Protein Folding Trajectory Analysis
using Patterned Clusters |
|
116 |
A Novel Method for Protein
Subcellular Localization: Combining Residue-couple Model and SVM |
|
118 |
A Better Gap Penalty for
Pairwise-SVM |
|
120 |
PRIMA: PEPTIDE ROBUST IDENTIFICATION
FROM MS/MS SPECTRA |
|
123 |
BLOMAP: AN ENCODING OF AMINO ACIDS
WHICH IMPROVES SIGNAL PEPTIDE CLEAVAGE SITE PREDICTION |
|
125 |
Exact Algorithms for Motif Search |
|
126 |
Exact Algorithms for Planted Motif
Challenge Problems |
|
128 |
Quartet Based Phylogeny
Reconstruction with Constraint Programming |
|
130 |
Bacterial Population Assay via k-mer
Analysis |
|
138 |
MODELING 5' REGIONS OF HISTONE GENES
USING BAYESIAN NETWORKS |
|
142 |
Unique Peptide Prediction of RNase
Family Sequences based on Reinforced Merging Algorithms |
|
146 |
Clique Based Algorithms for Protein
Threading with Profiles and Constraints |
|
147 |
THE USE OF FUNCTIONAL DOMAINS TO
IMPROVE TRANSMEMBRANE PROTEIN TOPOLOGY PREDICTION |
|
151 |
Improved Algorithms for Multiplex
PCR Primer Set Selection with Amplification Length Constraints |
|
161 |
CLASSIFICATION OF PROTEIN 3D FOLDS
BY HIDDEN MARKOV LEARNING ON SEQUENCES OF STRUCTURAL ALPHABETS |
162 |
Feature dimension reduction for
microarray data analysis using Local Linear Embedding |
|
173 |
Inferring phylogenetic relationships
avoiding forbidden rooted triplets |
|
180 |
VIRUS IDENTIFICATION BY USING A
DATABASE TO DYNAMICALLY AID PROBE DESIGN |
|
184 |
SVM-RFE peak selection for cancer
classification with mass spectrometry data |
|
186 |
An $O(n^2)$ Algorithm for Signed
Translocation |
|
188 |
A highly scalable algorithm for the
extraction of cis-regulatory regions |
|
192 |
Allowing Mismatches in Anchors for
Whole Genome Alignment: Generation and Effectiveness |
|
195 |
Detecting residues in targeting
peptides |
|
196 |
CELLS IN SILICO (CIS) : A
BIOMEDICAL SIMULATION FRAMEWORK BASED ON MARKOV RANDOM FIELD |
|
201 |
TOWARD DISCOVERING DISEASE-SPECIFIC
GENE NETWORKS |
|
203 |
A new regulatory interactions
suggested by simulations for circadian genetic control mechanism in mammals |
|
204 |
High Dimensional Indexing for
Protein Structure Matching |
|
209 |
A Support Vector Machine Approach
for Prediction of T Cell Epitopes |
|
212 |
VOTING ALGORITHMS FOR DISCOVERING
LONG MOTIFS |
|
216 |
PROFILES AND FUZZY K-NEAREST
NEIGHBOR ALGORITHM FOR PROTEIN SECONDARY STRUCTURE PREDICTION |
236 |
Consensus Fold Recognition by
Predicted Model Quality |
|
241 |
HYBRID REGISTRATION FOR
TWO-DIMENSIONAL GEL PROTEIN IMAGES |
|
246 |
PLS and SVD based penalized logistic
regression for cancer classification using microarray data |
|
248 |
GENETIC ALGORITHMS AND SILHOUETTE
MEASURES APPLIED TO MICROARRAY DATA CLASSIFICATION |
|
|
|
|
|
|
|
|
|
|
|
|
|
|