DNNESCAN has discovered 7 putative TFBSs for 1 TF proteins in 5 genomic regions. See scan settings.

Discovered TFBSs

#Chr	Promoter ID	TF	Strand	Kmer ID	Kmer	Rel. Start	Rel. End	Abs. Start	Abs. End
1	Genomic_Region	ABF1(motif, model)	+	298	ATCATTTGCCACG	298	310	45320	45332
1	Genomic_Region	ABF1(motif, model)	+	478	ATCATTCTGGACG	478	490	45500	45512
2	IGR_YBR011C_YBR012W-A	ABF1(motif, model)	-	174	GTCATTAGATACG	174	186	258149	258161
2	IGR_YBR145W_YBR146W	ABF1(motif, model)	-	266	ATCATTTTATACG	266	278	535083	535095
3	IGR_YCR081W_YCR082W	ABF1(motif, model)	-	99	GTCATTTGGTACG	99	111	258753	258765
14	Upstream_YNL118C_Region	ABF1(motif, model)	-	174	ATCACTAAGCACG	174	186	405738	405750
14	Upstream_YNL118C_Region	ABF1(motif, model)	+	225	ATCACTATATACG	225	237	405789	405801

TF Motifs

ABF1

DNNESCAN Models

ABF1: Selected features [PWMConst, Twist_shift(CC/GG)], DNNE model [2 inputs, 1 output(s), 5 RVFLNs, 5 neurons, lambda=0.55], AEF Model [lambda1=0.00005, lambda2=0.01654]

DNNESCAN Settings

Operation: scan
TF protein(s): abf1
Input file format: fasta
Output format: html
Overlapping removal: all